Transcriptomic and metabolomic analyses of cucumber fruit peels reveal a developmental increase in terpenoid glycosides associated with age-related resistance to Phytophthora capsici.
Identifieur interne : 000893 ( Main/Exploration ); précédent : 000892; suivant : 000894Transcriptomic and metabolomic analyses of cucumber fruit peels reveal a developmental increase in terpenoid glycosides associated with age-related resistance to Phytophthora capsici.
Auteurs : Ben N. Mansfeld [États-Unis] ; Marivi Colle [États-Unis] ; Yunyan Kang [États-Unis, République populaire de Chine] ; A Daniel Jones [États-Unis] ; Rebecca Grumet [États-Unis]Source :
- Horticulture research [ 2052-7276 ] ; 2017.
Abstract
The oomycete, Phytophthora capsici, infects cucumber (Cucumis sativus L.) fruit. An age-related resistance (ARR) to this pathogen was previously observed in fruit of cultivar 'Vlaspik' and shown to be associated with the peel. Young fruits are highly susceptible, but develop resistance at ~10-12 days post pollination (dpp). Peels from resistant (16 dpp) versus susceptible (8 dpp) age fruit are enriched with genes associated with defense, and methanolic extracts from resistant age peels inhibit pathogen growth. Here we compared developing fruits from 'Vlaspik' with those of 'Gy14', a line that does not exhibit ARR. Transcriptomic analysis of peels of the two lines at 8 and 16 dpp identified 80 genes that were developmentally upregulated in resistant 'Vlaspik' 16 dpp versus 8 dpp, but not in susceptible 'Gy14' at 16 dpp. A large number of these genes are annotated to be associated with defense and/or specialized metabolism, including four putative resistance (R) genes, and numerous genes involved in flavonoid and terpenoid synthesis and decoration. Untargeted metabolomic analysis was performed on extracts from 8 and 16 dpp 'Vlaspik' and 'Gy14' fruit peels using Ultra-Performance Liquid Chromatography and Quadrupole Time-of-Flight Mass Spectrometry. Multivariate analysis of the metabolomes identified 113 ions uniquely abundant in resistant 'Vlaspik' 16 dpp peel extracts. The most abundant compounds in this group had relative mass defects consistent with terpenoid glycosides. Two of the three most abundant ions were annotated as glycosylated nor-terpenoid esters. Together, these analyses reveal potential mechanisms by which ARR to P. capsici may be conferred.
DOI: 10.1038/hortres.2017.22
PubMed: 28580151
PubMed Central: PMC5442961
Affiliations:
- République populaire de Chine, États-Unis
- Guangdong, Michigan
- East Lansing, Jiangmen
- Université d'État du Michigan
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Mansfeld</name><affiliation wicri:level="4"><nlm:affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation></author><author><name sortKey="Colle, Marivi" sort="Colle, Marivi" uniqKey="Colle M" first="Marivi" last="Colle">Marivi Colle</name><affiliation wicri:level="4"><nlm:affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation></author><author><name sortKey="Kang, Yunyan" sort="Kang, Yunyan" uniqKey="Kang Y" first="Yunyan" last="Kang">Yunyan Kang</name><affiliation wicri:level="4"><nlm:affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation><affiliation wicri:level="1"><nlm:affiliation>College of Horticulture, South China Agricultural University, Guangzhou 510642, China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>College of Horticulture, South China Agricultural University, Guangzhou 510642</wicri:regionArea><placeName><settlement type="city">Jiangmen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Jones, A Daniel" sort="Jones, A Daniel" uniqKey="Jones A" first="A Daniel" last="Jones">A Daniel Jones</name><affiliation wicri:level="4"><nlm:affiliation>Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation><affiliation wicri:level="4"><nlm:affiliation>Department of Chemistry, Michigan State University, East Lansing, MI 48824, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Chemistry, Michigan State University, East Lansing, MI 48824</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation></author><author><name sortKey="Grumet, Rebecca" sort="Grumet, Rebecca" uniqKey="Grumet R" first="Rebecca" last="Grumet">Rebecca Grumet</name><affiliation wicri:level="4"><nlm:affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824</wicri:regionArea><placeName><region type="state">Michigan</region><settlement type="city">East Lansing</settlement></placeName><orgName type="university">Université d'État du Michigan</orgName></affiliation></author></analytic><series><title level="j">Horticulture research</title><idno type="ISSN">2052-7276</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The oomycete, <i>Phytophthora capsici</i>, infects cucumber (<i>Cucumis sativus</i> L.) fruit. An age-related resistance (ARR) to this pathogen was previously observed in fruit of cultivar 'Vlaspik' and shown to be associated with the peel. Young fruits are highly susceptible, but develop resistance at ~10-12 days post pollination (dpp). Peels from resistant (16 dpp) versus susceptible (8 dpp) age fruit are enriched with genes associated with defense, and methanolic extracts from resistant age peels inhibit pathogen growth. Here we compared developing fruits from 'Vlaspik' with those of 'Gy14', a line that does not exhibit ARR. Transcriptomic analysis of peels of the two lines at 8 and 16 dpp identified 80 genes that were developmentally upregulated in resistant 'Vlaspik' 16 dpp versus 8 dpp, but not in susceptible 'Gy14' at 16 dpp. A large number of these genes are annotated to be associated with defense and/or specialized metabolism, including four putative resistance (R) genes, and numerous genes involved in flavonoid and terpenoid synthesis and decoration. Untargeted metabolomic analysis was performed on extracts from 8 and 16 dpp 'Vlaspik' and 'Gy14' fruit peels using Ultra-Performance Liquid Chromatography and Quadrupole Time-of-Flight Mass Spectrometry. Multivariate analysis of the metabolomes identified 113 ions uniquely abundant in resistant 'Vlaspik' 16 dpp peel extracts. The most abundant compounds in this group had relative mass defects consistent with terpenoid glycosides. Two of the three most abundant ions were annotated as glycosylated nor-terpenoid esters. Together, these analyses reveal potential mechanisms by which ARR to <i>P. capsici</i> may be conferred.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">28580151</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>29</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">2052-7276</ISSN><JournalIssue CitedMedium="Print"><Volume>4</Volume><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>Horticulture research</Title><ISOAbbreviation>Hortic Res</ISOAbbreviation></Journal><ArticleTitle>Transcriptomic and metabolomic analyses of cucumber fruit peels reveal a developmental increase in terpenoid glycosides associated with age-related resistance to <i>Phytophthora capsici</i>.</ArticleTitle><Pagination><MedlinePgn>17022</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/hortres.2017.22</ELocationID><Abstract><AbstractText>The oomycete, <i>Phytophthora capsici</i>, infects cucumber (<i>Cucumis sativus</i> L.) fruit. An age-related resistance (ARR) to this pathogen was previously observed in fruit of cultivar 'Vlaspik' and shown to be associated with the peel. Young fruits are highly susceptible, but develop resistance at ~10-12 days post pollination (dpp). Peels from resistant (16 dpp) versus susceptible (8 dpp) age fruit are enriched with genes associated with defense, and methanolic extracts from resistant age peels inhibit pathogen growth. Here we compared developing fruits from 'Vlaspik' with those of 'Gy14', a line that does not exhibit ARR. Transcriptomic analysis of peels of the two lines at 8 and 16 dpp identified 80 genes that were developmentally upregulated in resistant 'Vlaspik' 16 dpp versus 8 dpp, but not in susceptible 'Gy14' at 16 dpp. A large number of these genes are annotated to be associated with defense and/or specialized metabolism, including four putative resistance (R) genes, and numerous genes involved in flavonoid and terpenoid synthesis and decoration. Untargeted metabolomic analysis was performed on extracts from 8 and 16 dpp 'Vlaspik' and 'Gy14' fruit peels using Ultra-Performance Liquid Chromatography and Quadrupole Time-of-Flight Mass Spectrometry. Multivariate analysis of the metabolomes identified 113 ions uniquely abundant in resistant 'Vlaspik' 16 dpp peel extracts. The most abundant compounds in this group had relative mass defects consistent with terpenoid glycosides. Two of the three most abundant ions were annotated as glycosylated nor-terpenoid esters. Together, these analyses reveal potential mechanisms by which ARR to <i>P. capsici</i> may be conferred.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Mansfeld</LastName><ForeName>Ben N</ForeName><Initials>BN</Initials><AffiliationInfo><Affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Colle</LastName><ForeName>Marivi</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kang</LastName><ForeName>Yunyan</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>College of Horticulture, South China Agricultural University, Guangzhou 510642, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Jones</LastName><ForeName>A Daniel</ForeName><Initials>AD</Initials><AffiliationInfo><Affiliation>Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Chemistry, Michigan State University, East Lansing, MI 48824, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Grumet</LastName><ForeName>Rebecca</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Graduate Program in Plant Breeding, Genetics and Biotechnology, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>05</Month><Day>24</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Hortic Res</MedlineTA><NlmUniqueID>101655540</NlmUniqueID><ISSNLinking>2052-7276</ISSNLinking></MedlineJournalInfo><CoiStatement>The authors declare no conflict of interest.</CoiStatement></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>02</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2017</Year><Month>04</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>04</Month><Day>25</Day></PubMedPubDate><PubMedPubDate 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Mansfeld</name></region><name sortKey="Colle, Marivi" sort="Colle, Marivi" uniqKey="Colle M" first="Marivi" last="Colle">Marivi Colle</name><name sortKey="Grumet, Rebecca" sort="Grumet, Rebecca" uniqKey="Grumet R" first="Rebecca" last="Grumet">Rebecca Grumet</name><name sortKey="Jones, A Daniel" sort="Jones, A Daniel" uniqKey="Jones A" first="A Daniel" last="Jones">A Daniel Jones</name><name sortKey="Jones, A Daniel" sort="Jones, A Daniel" uniqKey="Jones A" first="A Daniel" last="Jones">A Daniel Jones</name><name sortKey="Kang, Yunyan" sort="Kang, Yunyan" uniqKey="Kang Y" first="Yunyan" last="Kang">Yunyan Kang</name></country><country name="République populaire de Chine"><region name="Guangdong"><name sortKey="Kang, Yunyan" sort="Kang, Yunyan" uniqKey="Kang Y" first="Yunyan" last="Kang">Yunyan Kang</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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